HCSGD entry for LYPD1
1. General information
| Official gene symbol | LYPD1 |
|---|---|
| Entrez ID | 116372 |
| Gene full name | LY6/PLAUR domain containing 1 |
| Other gene symbols | LYPDC1 PHTS |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0031225 | Anchored component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3170464648 | 0.0008427833 | 0.9999902473 | 0.0551813433 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5916752486 |
| GSE13712_SHEAR | Up | 0.7708782125 |
| GSE13712_STATIC | Up | 1.3137261529 |
| GSE19018 | Down | -0.3492212266 |
| GSE19899_A1 | Down | -3.5126564381 |
| GSE19899_A2 | Down | -1.2573168424 |
| PubMed_21979375_A1 | Down | -1.1656763454 |
| PubMed_21979375_A2 | Down | -3.3155378451 |
| GSE35957 | Down | -2.7357018118 |
| GSE36640 | Down | -0.4542294081 |
| GSE54402 | Up | 0.6027346347 |
| GSE9593 | Up | 0.0513214017 |
| GSE43922 | Down | -1.1752678260 |
| GSE24585 | Down | -1.3303523429 |
| GSE37065 | Up | 0.2719531255 |
| GSE28863_A1 | Down | -0.1270041523 |
| GSE28863_A2 | Down | -0.1008349374 |
| GSE28863_A3 | Up | 0.2245384385 |
| GSE28863_A4 | Up | 0.0908913703 |
| GSE48662 | Down | -0.2094457341 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-423-3p | MIMAT0001340 | MIRT042635 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
