HCSGD entry for BATF2
1. General information
| Official gene symbol | BATF2 |
|---|---|
| Entrez ID | 116071 |
| Gene full name | basic leucine zipper transcription factor, ATF-like 2 |
| Other gene symbols | SARI |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0042832 | Defense response to protozoan | ISS | biological_process |
| GO:0043011 | Myeloid dendritic cell differentiation | ISS | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1075205235 | 0.8701844269 | 0.6809546920 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0676241758 |
| GSE13712_SHEAR | Up | 0.3911795051 |
| GSE13712_STATIC | Up | 1.1990157425 |
| GSE19018 | Up | 0.1060483604 |
| GSE19899_A1 | Up | 0.0851001141 |
| GSE19899_A2 | Up | 0.1788865371 |
| PubMed_21979375_A1 | Down | -0.3517143230 |
| PubMed_21979375_A2 | Up | 0.4311990167 |
| GSE35957 | Down | -0.6580920597 |
| GSE36640 | Up | 0.3055161786 |
| GSE54402 | Down | -0.2877683906 |
| GSE9593 | Up | 0.1403184325 |
| GSE43922 | Up | 0.1856458713 |
| GSE24585 | Down | -0.0527187839 |
| GSE37065 | Up | 0.7381035832 |
| GSE28863_A1 | Up | 0.0144353399 |
| GSE28863_A2 | Up | 0.2839270871 |
| GSE28863_A3 | Up | 0.1989084541 |
| GSE28863_A4 | Up | 0.0842651911 |
| GSE48662 | Down | -0.1972019579 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017734 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-375 | MIMAT0000728 | MIRT019820 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-122-5p | MIMAT0000421 | MIRT023328 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
