HCSGD entry for ZNF689
1. General information
| Official gene symbol | ZNF689 |
|---|---|
| Entrez ID | 115509 |
| Gene full name | zinc finger protein 689 |
| Other gene symbols | TIPUH1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0035914 | Skeletal muscle cell differentiation | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8929079632 | 0.1164847422 | 0.9999902473 | 0.6537990194 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1593772479 |
| GSE13712_SHEAR | Down | -0.3643587662 |
| GSE13712_STATIC | Down | -0.1694099962 |
| GSE19018 | Down | -0.3259831746 |
| GSE19899_A1 | Down | -0.1933812517 |
| GSE19899_A2 | Down | -0.3464252998 |
| PubMed_21979375_A1 | Up | 0.3876343591 |
| PubMed_21979375_A2 | Up | 0.0861496235 |
| GSE35957 | Down | -0.4032027635 |
| GSE36640 | Down | -0.2814470174 |
| GSE54402 | Down | -0.0355139373 |
| GSE9593 | Down | -0.3095881928 |
| GSE43922 | Up | 0.0992085266 |
| GSE24585 | Down | -0.4168162228 |
| GSE37065 | Down | -0.0656140664 |
| GSE28863_A1 | Up | 0.0544612405 |
| GSE28863_A2 | Up | 0.0987747757 |
| GSE28863_A3 | Up | 0.0852590952 |
| GSE28863_A4 | Up | 0.1206197619 |
| GSE48662 | Down | -0.3165694570 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-106b-3p | MIMAT0004672 | MIRT038592 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-326 | MIMAT0000756 | MIRT043635 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050822 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3176 | MIMAT0015053 | MIRT052788 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
