HCSGD entry for LRRC42
1. General information
| Official gene symbol | LRRC42 |
|---|---|
| Entrez ID | 115353 |
| Gene full name | leucine rich repeat containing 42 |
| Other gene symbols | dJ167A19.4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
Not in the Gene ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9378252232 | 0.0248903347 | 0.9999902473 | 0.3044323885 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1906984401 |
| GSE13712_SHEAR | Up | 0.2219188330 |
| GSE13712_STATIC | Up | 0.1445825908 |
| GSE19018 | Down | -0.0239362679 |
| GSE19899_A1 | Down | -0.9514042769 |
| GSE19899_A2 | Down | -0.6654216779 |
| PubMed_21979375_A1 | Down | -0.7682417838 |
| PubMed_21979375_A2 | Down | -0.9513980147 |
| GSE35957 | Down | -0.3220868187 |
| GSE36640 | Down | -0.4399354115 |
| GSE54402 | Down | -0.1834526174 |
| GSE9593 | Up | 0.2351705322 |
| GSE43922 | Down | -0.3213419888 |
| GSE24585 | Up | 0.7863729675 |
| GSE37065 | Down | -0.0781426538 |
| GSE28863_A1 | Down | -0.0005567011 |
| GSE28863_A2 | Up | 0.0972989786 |
| GSE28863_A3 | Down | -0.3750904151 |
| GSE28863_A4 | Down | -0.1329282416 |
| GSE48662 | Down | -0.5900270072 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022820 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039918 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045634 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30a-3p | MIMAT0000088 | MIRT049909 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT051726 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052557 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
