HCSGD entry for PCMTD1
1. General information
| Official gene symbol | PCMTD1 |
|---|---|
| Entrez ID | 115294 |
| Gene full name | protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004719 | Protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0474247749 | 0.0423280384 | 0.4813989587 | 0.3871147672 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1270478274 |
| GSE13712_SHEAR | Down | -0.4440544038 |
| GSE13712_STATIC | Down | -0.1156456499 |
| GSE19018 | Up | 0.9733156330 |
| GSE19899_A1 | Up | 0.4077024020 |
| GSE19899_A2 | Up | 0.3139965741 |
| PubMed_21979375_A1 | Down | -0.5157375714 |
| PubMed_21979375_A2 | Up | 0.0756981963 |
| GSE35957 | Up | 0.3104437146 |
| GSE36640 | Up | 0.5884240121 |
| GSE54402 | Up | 0.0704235263 |
| GSE9593 | Up | 0.2570247776 |
| GSE43922 | Up | 0.0432415268 |
| GSE24585 | Up | 0.8108957706 |
| GSE37065 | Up | 0.3951118516 |
| GSE28863_A1 | Down | -0.2622122651 |
| GSE28863_A2 | Down | -1.6627538019 |
| GSE28863_A3 | Down | -1.0393151832 |
| GSE28863_A4 | Down | -0.7823577850 |
| GSE48662 | Down | -0.0592763603 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017253 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040682 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049533 | CLASH//qRT-PCR | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
