HCSGD entry for GALNT13

1. General information

Official gene symbolGALNT13
Entrez ID114805
Gene full nameUDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)
Other gene symbolsGalNAc-T13 H_NH0187G20.1 WUGSC:H_NH0187G20.1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000139Golgi membraneTAScellular_component
GO:0004653Polypeptide N-acetylgalactosaminyltransferase activityIEAmolecular_function
GO:0005794Golgi apparatusIEAcellular_component
GO:0006486Protein glycosylationIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
GO:0016266O-glycan processingTASbiological_process
GO:0016757Transferase activity, transferring glycosyl groupsIEAmolecular_function
GO:0043687Post-translational protein modificationTASbiological_process
GO:0044267Cellular protein metabolic processTASbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.23860516700.92617719310.92455867551.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0830391219
GSE13712_SHEARDown-0.1236689257
GSE13712_STATICUp0.0022992730
GSE19018Down-0.0194948026
GSE19899_A1Up0.0778164345
GSE19899_A2Up0.0142314885
PubMed_21979375_A1Up0.2749897356
PubMed_21979375_A2Up0.0125369872
GSE35957Up0.1603159518
GSE36640Down-0.0256903186
GSE54402Down-0.0172513035
GSE9593Up0.0176604237
GSE43922Up0.0194052339
GSE24585Up1.6168765397
GSE37065Down-0.0378530779
GSE28863_A1Down-0.0736814316
GSE28863_A2Up0.3599974200
GSE28863_A3Up0.1449603332
GSE28863_A4Up0.0170985291
GSE48662Down-0.0730373726

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.