HCSGD entry for SFT2D1
1. General information
| Official gene symbol | SFT2D1 |
|---|---|
| Entrez ID | 113402 |
| Gene full name | SFT2 domain containing 1 |
| Other gene symbols | C6orf83 pRGR1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8778993655 | 0.4655978610 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0929060673 |
| GSE13712_SHEAR | Up | 0.1644726715 |
| GSE13712_STATIC | Up | 0.1036868221 |
| GSE19018 | Down | -0.0593261999 |
| GSE19899_A1 | Up | 0.0210682845 |
| GSE19899_A2 | Down | -0.0335207838 |
| PubMed_21979375_A1 | Up | 0.0583389797 |
| PubMed_21979375_A2 | Up | 0.0093821435 |
| GSE35957 | Down | -0.0731140859 |
| GSE36640 | Up | 0.0503807561 |
| GSE54402 | Up | 0.1129273784 |
| GSE9593 | Down | -0.0840225584 |
| GSE43922 | Down | -0.0311138301 |
| GSE24585 | Down | -0.1508418661 |
| GSE37065 | Up | 0.1828003648 |
| GSE28863_A1 | Down | -0.1095743799 |
| GSE28863_A2 | Up | 0.1588737104 |
| GSE28863_A3 | Down | -0.2135049252 |
| GSE28863_A4 | Down | -0.1094984873 |
| GSE48662 | Down | -0.4000545728 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-425-5p | MIMAT0003393 | MIRT016674 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046469 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7g-5p | MIMAT0000414 | MIRT046559 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
