HCSGD entry for GLCCI1
1. General information
| Official gene symbol | GLCCI1 |
|---|---|
| Entrez ID | 113263 |
| Gene full name | glucocorticoid induced transcript 1 |
| Other gene symbols | FAM117C GCTR GIG18 TSSN1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7873671251 | 0.1462684624 | 0.9999902473 | 0.7386669609 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1962149010 |
| GSE13712_SHEAR | Down | -0.4026595140 |
| GSE13712_STATIC | Up | 0.0155417475 |
| GSE19018 | Up | 0.1542596502 |
| GSE19899_A1 | Up | 0.1600798975 |
| GSE19899_A2 | Down | -0.1164778209 |
| PubMed_21979375_A1 | Down | -0.7214716598 |
| PubMed_21979375_A2 | Down | -0.2304161282 |
| GSE35957 | Down | -0.2413926228 |
| GSE36640 | Up | 0.3340279128 |
| GSE54402 | Up | 0.3527274468 |
| GSE9593 | Down | -0.5511384899 |
| GSE43922 | Down | -0.1439262303 |
| GSE24585 | Up | 0.0376691449 |
| GSE37065 | Down | -0.1871120306 |
| GSE28863_A1 | Down | -0.1846195697 |
| GSE28863_A2 | Up | 0.1441146014 |
| GSE28863_A3 | Down | -0.2023598336 |
| GSE28863_A4 | Down | -0.1433566158 |
| GSE48662 | Down | -0.1792851762 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-21-5p | MIMAT0000076 | MIRT002411 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT002411 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT017656 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026406 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-21-5p | MIMAT0000076 | NA | hsa-miR-21 | 17991735 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
