HCSGD entry for TMC6
1. General information
| Official gene symbol | TMC6 |
|---|---|
| Entrez ID | 11322 |
| Gene full name | transmembrane channel-like 6 |
| Other gene symbols | EV1 EVER1 EVIN1 LAK-4P |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0006811 | Ion transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2870982865 | 0.9305318985 | 0.9865372193 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0373720769 |
| GSE13712_SHEAR | Up | 0.4257902800 |
| GSE13712_STATIC | Up | 0.7708376497 |
| GSE19018 | Up | 0.0911176184 |
| GSE19899_A1 | Up | 0.0639635849 |
| GSE19899_A2 | Up | 0.1836050353 |
| PubMed_21979375_A1 | Up | 0.0489064950 |
| PubMed_21979375_A2 | Down | -0.0175225860 |
| GSE35957 | Up | 0.0053196520 |
| GSE36640 | Down | -0.0180201927 |
| GSE54402 | Up | 0.0018175290 |
| GSE9593 | Down | -0.0062234411 |
| GSE43922 | Up | 0.0442820307 |
| GSE24585 | Up | 0.1396344873 |
| GSE37065 | Down | -0.0610807888 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.0442318896 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017951 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-195-5p | MIMAT0000461 | MIRT044869 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
