HCSGD entry for RPUSD1

1. General information

Official gene symbolRPUSD1
Entrez ID113000
Gene full nameRNA pseudouridylate synthase domain containing 1
Other gene symbolsC16orf40 RLUCL
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001522Pseudouridine synthesisIEAbiological_process
GO:0003674Molecular_functionNDmolecular_function
GO:0003723RNA bindingIEAmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0008150Biological_processNDbiological_process
GO:0009982Pseudouridine synthase activityIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.19651776530.60233111960.85794395421.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0285586271
GSE13712_SHEARUp0.3245433923
GSE13712_STATICDown-0.1816466100
GSE19018Up0.1142069576
GSE19899_A1Down-0.0931727512
GSE19899_A2Up0.5771667195
PubMed_21979375_A1Up0.7530738595
PubMed_21979375_A2Up0.2449017614
GSE35957Up0.2473381174
GSE36640Down-0.0608487734
GSE54402Up0.1813312429
GSE9593Down-0.0539543990
GSE43922Up0.7459826195
GSE24585Down-0.6124447640
GSE37065Down-0.1467639731
GSE28863_A1Down-0.0966550689
GSE28863_A2Down-0.1207907867
GSE28863_A3Down-0.1474103562
GSE28863_A4Up0.0226904227
GSE48662Down-0.0080762714

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.