HCSGD entry for B4GALT7
1. General information
| Official gene symbol | B4GALT7 |
|---|---|
| Entrez ID | 11285 |
| Gene full name | xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 |
| Other gene symbols | XGALT1 XGPT1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0003831 | Beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity | IDA | molecular_function |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | IEA TAS | biological_process |
| GO:0006024 | Glycosaminoglycan biosynthetic process | IDA | biological_process |
| GO:0006029 | Proteoglycan metabolic process | IMP | biological_process |
| GO:0006464 | Cellular protein modification process | TAS | biological_process |
| GO:0006487 | Protein N-linked glycosylation | IDA | biological_process |
| GO:0008378 | Galactosyltransferase activity | IDA IMP | molecular_function |
| GO:0016021 | Integral component of membrane | IDA | cellular_component |
| GO:0016757 | Transferase activity, transferring glycosyl groups | IEA | molecular_function |
| GO:0030145 | Manganese ion binding | IDA | molecular_function |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0030204 | Chondroitin sulfate metabolic process | TAS | biological_process |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0043206 | Extracellular fibril organization | IMP | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046525 | Xylosylprotein 4-beta-galactosyltransferase activity | IDA | molecular_function |
| GO:0048147 | Negative regulation of fibroblast proliferation | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2230223890 | 0.5476453782 | 0.9040289793 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1996694156 |
| GSE13712_SHEAR | Down | -0.7664118407 |
| GSE13712_STATIC | Down | -0.1886005533 |
| GSE19018 | Up | 0.3649757658 |
| GSE19899_A1 | Down | -0.0716104124 |
| GSE19899_A2 | Up | 0.5052931159 |
| PubMed_21979375_A1 | Up | 0.7286976898 |
| PubMed_21979375_A2 | Up | 0.4839709193 |
| GSE35957 | Down | -0.1773462600 |
| GSE36640 | Up | 0.5523976659 |
| GSE54402 | Up | 0.1720466128 |
| GSE9593 | Up | 0.1519772152 |
| GSE43922 | Down | -0.0113284484 |
| GSE24585 | Down | -0.1114946665 |
| GSE37065 | Down | -0.0752058784 |
| GSE28863_A1 | Up | 0.1595519244 |
| GSE28863_A2 | Up | 0.0093496195 |
| GSE28863_A3 | Down | -0.1679911336 |
| GSE28863_A4 | Down | -0.0151955017 |
| GSE48662 | Up | 0.3763651470 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1301-3p | MIMAT0005797 | MIRT036015 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
