HCSGD entry for GALNT6
1. General information
| Official gene symbol | GALNT6 |
|---|---|
| Entrez ID | 11226 |
| Gene full name | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) |
| Other gene symbols | GALNAC-T6 GalNAcT6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0004653 | Polypeptide N-acetylgalactosaminyltransferase activity | IEA | molecular_function |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0006493 | Protein O-linked glycosylation | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016266 | O-glycan processing | TAS | biological_process |
| GO:0016757 | Transferase activity, transferring glycosyl groups | IEA | molecular_function |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0048471 | Perinuclear region of cytoplasm | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0180718438 | 0.1879344668 | 0.3291826990 | 0.8403593851 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.6261451384 |
| GSE13712_SHEAR | Up | 1.3679898556 |
| GSE13712_STATIC | Up | 0.8151328271 |
| GSE19018 | Up | 0.3480683644 |
| GSE19899_A1 | Up | 0.6742851965 |
| GSE19899_A2 | Up | 0.9769099832 |
| PubMed_21979375_A1 | Down | -0.5096929762 |
| PubMed_21979375_A2 | Up | 0.7765635827 |
| GSE35957 | Down | -1.1235574851 |
| GSE36640 | Down | -0.2289640840 |
| GSE54402 | Up | 1.3420891970 |
| GSE9593 | Up | 0.1157707631 |
| GSE43922 | Up | 0.7262240788 |
| GSE24585 | Down | -0.4449770112 |
| GSE37065 | Down | -0.2173835246 |
| GSE28863_A1 | Down | -0.0984475621 |
| GSE28863_A2 | Down | -0.1026529078 |
| GSE28863_A3 | Down | -0.1250269543 |
| GSE28863_A4 | Down | -0.0117257911 |
| GSE48662 | Down | -0.6136861420 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
