HCSGD entry for WBP4
1. General information
| Official gene symbol | WBP4 |
|---|---|
| Entrez ID | 11193 |
| Gene full name | WW domain binding protein 4 |
| Other gene symbols | FBP21 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005681 | Spliceosomal complex | IEA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016607 | Nuclear speck | IDA | cellular_component |
| GO:0045292 | MRNA cis splicing, via spliceosome | IDA | biological_process |
| GO:0070064 | Proline-rich region binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9563629155 | 0.0270857414 | 0.9999902473 | 0.3140633480 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1851910484 |
| GSE13712_SHEAR | Down | -0.0609360035 |
| GSE13712_STATIC | Down | -0.0808534475 |
| GSE19018 | Up | 0.4416002784 |
| GSE19899_A1 | Down | -0.6479000401 |
| GSE19899_A2 | Down | -0.4949185351 |
| PubMed_21979375_A1 | Down | -0.3036372828 |
| PubMed_21979375_A2 | Down | -1.2531489407 |
| GSE35957 | Down | -0.1042553916 |
| GSE36640 | Down | -0.5419836721 |
| GSE54402 | Down | -0.1004778165 |
| GSE9593 | Down | -0.1962134212 |
| GSE43922 | Down | -0.5591859524 |
| GSE24585 | Up | 0.2357929342 |
| GSE37065 | Up | 0.1284299712 |
| GSE28863_A1 | Down | -0.2729234487 |
| GSE28863_A2 | Down | -0.2113183575 |
| GSE28863_A3 | Down | -0.0234336840 |
| GSE28863_A4 | Up | 0.1188561813 |
| GSE48662 | Down | -0.4013085673 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050577 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
