HCSGD entry for NUDT3
1. General information
| Official gene symbol | NUDT3 |
|---|---|
| Entrez ID | 11165 |
| Gene full name | nudix (nucleoside diphosphate linked moiety X)-type motif 3 |
| Other gene symbols | DIPP DIPP-1 DIPP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000287 | Magnesium ion binding | IDA | molecular_function |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0007267 | Cell-cell signaling | TAS | biological_process |
| GO:0008486 | Diphosphoinositol-polyphosphate diphosphatase activity | IDA | molecular_function |
| GO:0015961 | Diadenosine polyphosphate catabolic process | TAS | biological_process |
| GO:0043647 | Inositol phosphate metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0052840 | Inositol diphosphate tetrakisphosphate diphosphatase activity | IEA | molecular_function |
| GO:0052843 | Inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity | IEA | molecular_function |
| GO:0052844 | Inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity | IEA | molecular_function |
| GO:0052845 | Inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity | IEA | molecular_function |
| GO:0052846 | Inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity | IEA | molecular_function |
| GO:0052847 | Inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity | IEA | molecular_function |
| GO:0052848 | Inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity | IEA | molecular_function |
| GO:0071544 | Diphosphoinositol polyphosphate catabolic process | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8715191786 | 0.2061998746 | 0.9999902473 | 0.8809894335 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1231480946 |
| GSE13712_SHEAR | Down | -0.3896229032 |
| GSE13712_STATIC | Down | -0.4168447522 |
| GSE19018 | Down | -0.2303520784 |
| GSE19899_A1 | Down | -0.1173248160 |
| GSE19899_A2 | Down | -0.2123368308 |
| PubMed_21979375_A1 | Down | -0.6511946258 |
| PubMed_21979375_A2 | Up | 0.2393861925 |
| GSE35957 | Up | 0.5114705262 |
| GSE36640 | Down | -0.0655209698 |
| GSE54402 | Down | -0.4228232552 |
| GSE9593 | Up | 0.0986129265 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.4650478774 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-766-3p | MIMAT0003888 | MIRT039048 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051285 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
