HCSGD entry for PTP4A3
1. General information
| Official gene symbol | PTP4A3 |
|---|---|
| Entrez ID | 11156 |
| Gene full name | protein tyrosine phosphatase type IVA, member 3 |
| Other gene symbols | PRL-3 PRL-R PRL3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004727 | Prenylated protein tyrosine phosphatase activity | TAS | molecular_function |
| GO:0005769 | Early endosome | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0035335 | Peptidyl-tyrosine dephosphorylation | TAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8053676798 | 0.5455641959 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1206697069 |
| GSE13712_SHEAR | Down | -0.6036020461 |
| GSE13712_STATIC | Down | -0.2817242466 |
| GSE19018 | Up | 0.1952969487 |
| GSE19899_A1 | Down | -0.0898500280 |
| GSE19899_A2 | Up | 0.1004500771 |
| PubMed_21979375_A1 | Down | -0.2037276111 |
| PubMed_21979375_A2 | Down | -0.0503485798 |
| GSE35957 | Down | -0.1304300392 |
| GSE36640 | Down | -0.0349920333 |
| GSE54402 | Down | -0.0068977597 |
| GSE9593 | Up | 0.1651956440 |
| GSE43922 | Up | 0.0548912981 |
| GSE24585 | Up | 0.2611869085 |
| GSE37065 | Down | -0.0426016547 |
| GSE28863_A1 | Down | -0.0875154370 |
| GSE28863_A2 | Up | 0.0778529948 |
| GSE28863_A3 | Up | 0.2246595661 |
| GSE28863_A4 | Down | -0.0000107439 |
| GSE48662 | Up | 0.0869838408 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT004166 | Microarray | Functional MTI (Weak) | 16822819 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
