HCSGD entry for TMED1
1. General information
| Official gene symbol | TMED1 |
|---|---|
| Entrez ID | 11018 |
| Gene full name | transmembrane emp24 protein transport domain containing 1 |
| Other gene symbols | IL1RL1LG Il1rl1l ST2L Tp24 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005102 | Receptor binding | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0005793 | Endoplasmic reticulum-Golgi intermediate compartment | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0007165 | Signal transduction | TAS | biological_process |
| GO:0007267 | Cell-cell signaling | TAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0033116 | Endoplasmic reticulum-Golgi intermediate compartment membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1595313020 | 0.6872246799 | 0.7918203658 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3123880075 |
| GSE13712_SHEAR | Up | 0.2514376059 |
| GSE13712_STATIC | Up | 0.2684248132 |
| GSE19018 | Down | -0.0361959711 |
| GSE19899_A1 | Down | -0.5622320424 |
| GSE19899_A2 | Up | 0.0353583968 |
| PubMed_21979375_A1 | Up | 0.8090360143 |
| PubMed_21979375_A2 | Up | 0.0971683860 |
| GSE35957 | Down | -0.5275314795 |
| GSE36640 | Up | 0.1203924571 |
| GSE54402 | Down | -0.0089984081 |
| GSE9593 | Up | 0.0175345783 |
| GSE43922 | Up | 0.0641864658 |
| GSE24585 | Up | 0.0349095882 |
| GSE37065 | Up | 0.0833547575 |
| GSE28863_A1 | Down | -0.1104017337 |
| GSE28863_A2 | Down | -0.1877317405 |
| GSE28863_A3 | Up | 0.1767512834 |
| GSE28863_A4 | Up | 0.1000803184 |
| GSE48662 | Up | 0.4187479787 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022713 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028588 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-486-5p | MIMAT0002177 | MIRT041623 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051161 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
