HCSGD entry for SNRNP27
1. General information
| Official gene symbol | SNRNP27 |
|---|---|
| Entrez ID | 11017 |
| Gene full name | small nuclear ribonucleoprotein 27kDa (U4/U6.U5) |
| Other gene symbols | 27K RY1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | NAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006397 | MRNA processing | IEA | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0008380 | RNA splicing | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6666979332 | 0.4909191102 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2511377023 |
| GSE13712_SHEAR | Up | 0.0075678238 |
| GSE13712_STATIC | Up | 0.0407931020 |
| GSE19018 | Up | 0.1483076764 |
| GSE19899_A1 | Down | -0.2301238265 |
| GSE19899_A2 | Up | 0.0717793095 |
| PubMed_21979375_A1 | Down | -0.1721259830 |
| PubMed_21979375_A2 | Down | -0.0245899375 |
| GSE35957 | Down | -0.1837871644 |
| GSE36640 | Up | 0.2322626903 |
| GSE54402 | Down | -0.0961393417 |
| GSE9593 | Down | -0.0565032111 |
| GSE43922 | Down | -0.0734858744 |
| GSE24585 | Down | -0.1752155450 |
| GSE37065 | Up | 0.3239699158 |
| GSE28863_A1 | Down | -0.0103392364 |
| GSE28863_A2 | Up | 0.2181117256 |
| GSE28863_A3 | Up | 0.0614070058 |
| GSE28863_A4 | Down | -0.1488526147 |
| GSE48662 | Down | -0.1566940560 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-100-5p | MIMAT0000098 | MIRT048472 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
