HCSGD entry for ATF7
1. General information
| Official gene symbol | ATF7 |
|---|---|
| Entrez ID | 11016 |
| Gene full name | activating transcription factor 7 |
| Other gene symbols | ATFA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA NAS | cellular_component |
| GO:0005654 | Nucleoplasm | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IDA | biological_process |
| GO:0008134 | Transcription factor binding | IDA | molecular_function |
| GO:0016032 | Viral process | IEA | biological_process |
| GO:0034399 | Nuclear periphery | IDA | cellular_component |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0051019 | Mitogen-activated protein kinase binding | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0733293074 | 0.9857336803 | 0.5760942721 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0799156402 |
| GSE13712_SHEAR | Up | 0.1062391799 |
| GSE13712_STATIC | Down | -0.2464375012 |
| GSE19018 | Up | 0.0080777536 |
| GSE19899_A1 | Up | 0.3197224367 |
| GSE19899_A2 | Up | 0.4624109059 |
| PubMed_21979375_A1 | Up | 0.6354612745 |
| PubMed_21979375_A2 | Up | 0.6366989613 |
| GSE35957 | Down | -0.0645890953 |
| GSE36640 | Up | 0.3956118680 |
| GSE54402 | Up | 0.2855123474 |
| GSE9593 | Up | 0.1118950733 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.2574489964 |
| GSE28863_A2 | Up | 0.0787423022 |
| GSE28863_A3 | Up | 0.2346790904 |
| GSE28863_A4 | Up | 0.0041820718 |
| GSE48662 | Down | -0.0046560641 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-769-5p | MIMAT0003886 | MIRT016096 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031445 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
