HCSGD entry for SERINC3
1. General information
| Official gene symbol | SERINC3 |
|---|---|
| Entrez ID | 10955 |
| Gene full name | serine incorporator 3 |
| Other gene symbols | AIGP1 DIFF33 SBBI99 TDE TDE1 TMS-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:1902237 | Positive regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0029100034 | 0.9984999582 | 0.1445173585 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5528946840 |
| GSE13712_SHEAR | Up | 0.0893010596 |
| GSE13712_STATIC | Up | 0.0586228244 |
| GSE19018 | Up | 0.9231436810 |
| GSE19899_A1 | Up | 0.0637548049 |
| GSE19899_A2 | Up | 0.6856933612 |
| PubMed_21979375_A1 | Up | 0.4403969548 |
| PubMed_21979375_A2 | Up | 0.5006212978 |
| GSE35957 | Up | 0.4841351558 |
| GSE36640 | Up | 1.4421566165 |
| GSE54402 | Up | 0.1634145373 |
| GSE9593 | Up | 0.7575156078 |
| GSE43922 | Up | 0.0984315203 |
| GSE24585 | Up | 0.6377831760 |
| GSE37065 | Up | 0.2354550168 |
| GSE28863_A1 | Up | 0.3383319976 |
| GSE28863_A2 | Up | 0.2989180518 |
| GSE28863_A3 | Down | -0.1376583928 |
| GSE28863_A4 | Up | 0.0982890538 |
| GSE48662 | Up | 0.4173305765 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-204-5p | MIMAT0000265 | MIRT005842 | Luciferase reporter assay//Microarray//qRT-PCR | Functional MTI | 21282569 |
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020296 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-218-5p | MIMAT0000275 | MIRT024221 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031259 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039739 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
