HCSGD entry for C11orf58
1. General information
| Official gene symbol | C11orf58 |
|---|---|
| Entrez ID | 10944 |
| Gene full name | chromosome 11 open reading frame 58 |
| Other gene symbols | IMAGE145052 SMAP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
Not in the Gene ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8518903005 | 0.3073727442 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2250881953 |
| GSE13712_SHEAR | Down | -0.1849869767 |
| GSE13712_STATIC | Down | -0.1218398042 |
| GSE19018 | Down | -0.0474508792 |
| GSE19899_A1 | Down | -0.0634295940 |
| GSE19899_A2 | Down | -0.2605047594 |
| PubMed_21979375_A1 | Down | -0.1505429668 |
| PubMed_21979375_A2 | Down | -0.2764772815 |
| GSE35957 | Down | -0.0814089732 |
| GSE36640 | Down | -0.0566724223 |
| GSE54402 | Down | -0.1252723510 |
| GSE9593 | Down | -0.0587868979 |
| GSE43922 | Down | -0.1239436278 |
| GSE24585 | Up | 0.1273658510 |
| GSE37065 | Up | 0.0092089572 |
| GSE28863_A1 | Up | 0.3344986735 |
| GSE28863_A2 | Up | 0.2236181263 |
| GSE28863_A3 | Down | -0.4065029222 |
| GSE28863_A4 | Up | 0.2089201603 |
| GSE48662 | Down | -0.1544896659 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027051 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-769-3p | MIMAT0003887 | MIRT039117 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-504-5p | MIMAT0002875 | MIRT041087 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-145-5p | MIMAT0000437 | NA | hsa-miR-145 | 19915607 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
