HCSGD entry for MSL3
1. General information
| Official gene symbol | MSL3 |
|---|---|
| Entrez ID | 10943 |
| Gene full name | male-specific lethal 3 homolog (Drosophila) |
| Other gene symbols | MSL3L1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IDA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | TAS | molecular_function |
| GO:0005634 | Nucleus | IEA TAS | cellular_component |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0007275 | Multicellular organismal development | TAS | biological_process |
| GO:0035064 | Methylated histone residue binding | IDA | molecular_function |
| GO:0043984 | Histone H4-K16 acetylation | IDA | biological_process |
| GO:0072487 | MSL complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6117696820 | 0.5335401732 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1496187230 |
| GSE13712_SHEAR | Up | 0.0049896803 |
| GSE13712_STATIC | Down | -0.0630121055 |
| GSE19018 | Up | 0.0478102525 |
| GSE19899_A1 | Up | 0.0815638243 |
| GSE19899_A2 | Up | 0.0065974918 |
| PubMed_21979375_A1 | Up | 0.5407359189 |
| PubMed_21979375_A2 | Up | 0.1191117748 |
| GSE35957 | Down | -0.0385285623 |
| GSE36640 | Down | -0.0758935994 |
| GSE54402 | Up | 0.2701125910 |
| GSE9593 | Down | -0.2390726408 |
| GSE43922 | Up | 0.0081611319 |
| GSE24585 | Down | -0.6508115225 |
| GSE37065 | Up | 0.0529170135 |
| GSE28863_A1 | Up | 0.0003040071 |
| GSE28863_A2 | Up | 0.0481736312 |
| GSE28863_A3 | Down | -0.1913778206 |
| GSE28863_A4 | Up | 0.1571778541 |
| GSE48662 | Down | -0.2164785724 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-421 | MIMAT0003339 | MIRT039372 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042164 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045135 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-185-5p | MIMAT0000455 | MIRT045319 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047419 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047555 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-148a-3p | MIMAT0000243 | MIRT048029 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048163 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049772 | CLASH//qRT-PCR | Functional MTI (Weak) | 23622248 |
| hsa-miR-26a-5p | MIMAT0000082 | MIRT050069 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-5p | MIMAT0000072 | MIRT050657 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051183 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7f-5p | MIMAT0000067 | MIRT051352 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
