HCSGD entry for TCERG1
1. General information
| Official gene symbol | TCERG1 |
|---|---|
| Entrez ID | 10915 |
| Gene full name | transcription elongation regulator 1 |
| Other gene symbols | CA150 TAF2S Urn1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | IDA | biological_process |
| GO:0001103 | RNA polymerase II repressing transcription factor binding | IPI | molecular_function |
| GO:0001106 | RNA polymerase II transcription corepressor activity | IDA | molecular_function |
| GO:0003713 | Transcription coactivator activity | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0070064 | Proline-rich region binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9755169446 | 0.0472897116 | 0.9999902473 | 0.4079859718 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0806851319 |
| GSE13712_SHEAR | Down | -0.0107365364 |
| GSE13712_STATIC | Down | -0.3398678562 |
| GSE19018 | Up | 0.0461148563 |
| GSE19899_A1 | Down | -0.0447119448 |
| GSE19899_A2 | Up | 0.0118255555 |
| PubMed_21979375_A1 | Down | -0.6271531870 |
| PubMed_21979375_A2 | Down | -0.0239447659 |
| GSE35957 | Down | -0.2824202580 |
| GSE36640 | Down | -0.6129371155 |
| GSE54402 | Up | 0.0816724053 |
| GSE9593 | Down | -0.2395353863 |
| GSE43922 | Up | 0.0013600823 |
| GSE24585 | Down | -0.4964287323 |
| GSE37065 | Down | -0.0687484023 |
| GSE28863_A1 | Up | 0.1609947334 |
| GSE28863_A2 | Up | 0.3657053036 |
| GSE28863_A3 | Down | -0.3648031892 |
| GSE28863_A4 | Down | -0.1942100911 |
| GSE48662 | Down | -1.0122669847 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027828 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037086 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-769-5p | MIMAT0003886 | MIRT039212 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040393 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-328-3p | MIMAT0000752 | MIRT043747 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046720 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052589 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
