HCSGD entry for TSPAN9
1. General information
| Official gene symbol | TSPAN9 |
|---|---|
| Entrez ID | 10867 |
| Gene full name | tetraspanin 9 |
| Other gene symbols | NET-5 NET5 PP1057 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0016020 | Membrane | TAS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6699864557 | 0.1390941947 | 0.9999902473 | 0.7180031967 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1389855250 |
| GSE13712_SHEAR | Down | -0.9412647697 |
| GSE13712_STATIC | Down | -0.7876997497 |
| GSE19018 | Up | 0.2387531931 |
| GSE19899_A1 | Down | -0.0735909533 |
| GSE19899_A2 | Up | 0.3356395093 |
| PubMed_21979375_A1 | Down | -0.7259626974 |
| PubMed_21979375_A2 | Down | -0.4212149028 |
| GSE35957 | Up | 0.3055541788 |
| GSE36640 | Up | 0.2569866438 |
| GSE54402 | Down | -0.2155682571 |
| GSE9593 | Up | 0.1063385640 |
| GSE43922 | Up | 0.0482398860 |
| GSE24585 | Up | 0.0411142287 |
| GSE37065 | Down | -0.1952241064 |
| GSE28863_A1 | Down | -0.0868024347 |
| GSE28863_A2 | Up | 0.3597432546 |
| GSE28863_A3 | Down | -0.2192839896 |
| GSE28863_A4 | Down | -0.0302557109 |
| GSE48662 | Up | 0.5208102716 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1180-3p | MIMAT0005825 | MIRT035946 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044686 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
