HCSGD entry for ARID5A
1. General information
| Official gene symbol | ARID5A |
|---|---|
| Entrez ID | 10865 |
| Gene full name | AT rich interactive domain 5A (MRF1-like) |
| Other gene symbols | MRF-1 MRF1 RP11-363D14 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002062 | Chondrocyte differentiation | IEA | biological_process |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003682 | Chromatin binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005667 | Transcription factor complex | IEA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0008134 | Transcription factor binding | IEA | molecular_function |
| GO:0035066 | Positive regulation of histone acetylation | IEA | biological_process |
| GO:0045892 | Negative regulation of transcription, DNA-templated | TAS | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0933802933 | 0.9121168649 | 0.6407358446 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1572241673 |
| GSE13712_SHEAR | Up | 0.4261650528 |
| GSE13712_STATIC | Down | -0.1098137790 |
| GSE19018 | Down | -0.2320313327 |
| GSE19899_A1 | Down | -0.1067011236 |
| GSE19899_A2 | Up | 0.4247065925 |
| PubMed_21979375_A1 | Up | 0.5467732806 |
| PubMed_21979375_A2 | Up | 0.6275315561 |
| GSE35957 | Up | 0.0894691925 |
| GSE36640 | Up | 0.0200776822 |
| GSE54402 | Up | 0.1799801353 |
| GSE9593 | Up | 0.2462829317 |
| GSE43922 | Up | 0.0842170719 |
| GSE24585 | Up | 0.0543267510 |
| GSE37065 | Up | 0.1553866513 |
| GSE28863_A1 | Down | -0.0472839621 |
| GSE28863_A2 | Up | 0.3347054727 |
| GSE28863_A3 | Up | 0.3470915683 |
| GSE28863_A4 | Down | -0.0098768415 |
| GSE48662 | Up | 0.2265860739 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-324-5p | MIMAT0000761 | MIRT043168 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
