HCSGD entry for SEC24A
1. General information
| Official gene symbol | SEC24A |
|---|---|
| Entrez ID | 10802 |
| Gene full name | SEC24 family, member A (S. cerevisiae) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0002474 | Antigen processing and presentation of peptide antigen via MHC class I | TAS | biological_process |
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005789 | Endoplasmic reticulum membrane | TAS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006886 | Intracellular protein transport | IEA | biological_process |
| GO:0006888 | ER to Golgi vesicle-mediated transport | IEA TAS | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0012507 | ER to Golgi transport vesicle membrane | TAS | cellular_component |
| GO:0018279 | Protein N-linked glycosylation via asparagine | TAS | biological_process |
| GO:0019886 | Antigen processing and presentation of exogenous peptide antigen via MHC class II | TAS | biological_process |
| GO:0030127 | COPII vesicle coat | IEA | cellular_component |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0048208 | COPII vesicle coating | TAS | biological_process |
| GO:0048471 | Perinuclear region of cytoplasm | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0762914403 | 0.0755970898 | 0.5842499273 | 0.5192949426 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1172867626 |
| GSE13712_SHEAR | Up | 0.1504709243 |
| GSE13712_STATIC | Up | 0.2230737215 |
| GSE19018 | Up | 0.2934953383 |
| GSE19899_A1 | Up | 0.6382281395 |
| GSE19899_A2 | Up | 0.6856006089 |
| PubMed_21979375_A1 | Up | 1.0746504646 |
| PubMed_21979375_A2 | Up | 0.8914345827 |
| GSE35957 | Down | -0.2110437695 |
| GSE36640 | Up | 0.1047655797 |
| GSE54402 | Up | 0.6669027921 |
| GSE9593 | Down | -0.1228650742 |
| GSE43922 | Up | 0.3156737561 |
| GSE24585 | Up | 0.1319890655 |
| GSE37065 | Down | -0.1138606562 |
| GSE28863_A1 | Down | -0.9066854706 |
| GSE28863_A2 | Down | -0.9280345566 |
| GSE28863_A3 | Down | -0.7812106469 |
| GSE28863_A4 | Down | -0.5272406309 |
| GSE48662 | Down | -0.3662840366 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT001420 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028545 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-320a | MIMAT0000510 | MIRT044746 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046042 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049703 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
