HCSGD entry for CAPN9
1. General information
| Official gene symbol | CAPN9 |
|---|---|
| Entrez ID | 10753 |
| Gene full name | calpain 9 |
| Other gene symbols | GC36 nCL-4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004198 | Calcium-dependent cysteine-type endopeptidase activity | IEA | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0007586 | Digestion | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6954318225 | 0.9258683865 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0299489465 |
| GSE13712_SHEAR | Down | -0.1032082221 |
| GSE13712_STATIC | Up | 0.0892224431 |
| GSE19018 | Down | -0.0037602584 |
| GSE19899_A1 | Up | 0.1058287627 |
| GSE19899_A2 | Up | 0.1027377394 |
| PubMed_21979375_A1 | Up | 0.0393236578 |
| PubMed_21979375_A2 | Up | 0.0771327402 |
| GSE35957 | Down | -0.0907895600 |
| GSE36640 | Up | 0.1744474550 |
| GSE54402 | Up | 0.0554139836 |
| GSE9593 | Down | -0.0078243357 |
| GSE43922 | Up | 0.0176259788 |
| GSE24585 | Up | 0.1380352931 |
| GSE37065 | Down | -0.0012065010 |
| GSE28863_A1 | Down | -0.0552509032 |
| GSE28863_A2 | Up | 0.0092599187 |
| GSE28863_A3 | Up | 0.2439016027 |
| GSE28863_A4 | Up | 0.0384748834 |
| GSE48662 | Down | -0.0650003773 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029148 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
