HCSGD entry for CNPY3
1. General information
| Official gene symbol | CNPY3 |
|---|---|
| Entrez ID | 10695 |
| Gene full name | canopy 3 homolog (zebrafish) |
| Other gene symbols | CAG4A ERDA5 PRAT4A TNRC5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002224 | Toll-like receptor signaling pathway | TAS | biological_process |
| GO:0005102 | Receptor binding | IEA | molecular_function |
| GO:0005788 | Endoplasmic reticulum lumen | TAS | cellular_component |
| GO:0045087 | Innate immune response | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9661752441 | 0.0577131682 | 0.9999902473 | 0.4519691461 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1358865222 |
| GSE13712_SHEAR | Up | 0.0332508374 |
| GSE13712_STATIC | Down | -0.3968204229 |
| GSE19018 | Up | 0.1156793094 |
| GSE19899_A1 | Down | -0.2927690123 |
| GSE19899_A2 | Down | -0.1234486751 |
| PubMed_21979375_A1 | Down | -0.5351741262 |
| PubMed_21979375_A2 | Down | -0.9937856908 |
| GSE35957 | Down | -0.4433612679 |
| GSE36640 | Down | -0.3178181797 |
| GSE54402 | Up | 0.0603786953 |
| GSE9593 | Up | 0.0122847711 |
| GSE43922 | Down | -0.4005481680 |
| GSE24585 | Down | -0.2269368659 |
| GSE37065 | Down | -0.0239099803 |
| GSE28863_A1 | Down | -0.1438469052 |
| GSE28863_A2 | Up | 0.1596322696 |
| GSE28863_A3 | Down | -0.2698508182 |
| GSE28863_A4 | Down | -0.2146420649 |
| GSE48662 | Up | 0.3691986247 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-346 | MIMAT0000773 | MIRT004231 | Microarray | Functional MTI (Weak) | 16822819 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029859 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031881 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
