HCSGD entry for TAF6L

1. General information

Official gene symbolTAF6L
Entrez ID10629
Gene full nameTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
Other gene symbolsPAF65A
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000118Histone deacetylase complexTAScellular_component
GO:0003677DNA bindingTASmolecular_function
GO:0003713Transcription coactivator activityIDAmolecular_function
GO:0004402Histone acetyltransferase activityIDAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006338Chromatin remodelingTASbiological_process
GO:0006352DNA-templated transcription, initiationIEAbiological_process
GO:0006357Regulation of transcription from RNA polymerase II promoterTASbiological_process
GO:0030914STAGA complexIDAcellular_component
GO:0043966Histone H3 acetylationIDAbiological_process
GO:0046982Protein heterodimerization activityIEAmolecular_function
GO:0051090Regulation of sequence-specific DNA binding transcription factor activityIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.67387500470.79291163330.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0200756221
GSE13712_SHEARUp0.1413329419
GSE13712_STATICDown-0.1629758872
GSE19018Up0.0443245757
GSE19899_A1Down-0.0445030996
GSE19899_A2Up0.0832869321
PubMed_21979375_A1Down-0.1744726820
PubMed_21979375_A2Down-0.1488823023
GSE35957Up0.0108886628
GSE36640Up0.0062890659
GSE54402Up0.1829881798
GSE9593Up0.1444440797
GSE43922Up0.0503024260
GSE24585Up0.1182012422
GSE37065Up0.0250921201
GSE28863_A1Down-0.1089193997
GSE28863_A2Down-0.0579055411
GSE28863_A3Down-0.1807718760
GSE28863_A4Up0.0017594615
GSE48662Up0.6013518936

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-106b-5pMIMAT0000680MIRT020438MicroarrayFunctional MTI (Weak)17242205
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.