HCSGD entry for RPP30
1. General information
| Official gene symbol | RPP30 |
|---|---|
| Entrez ID | 10556 |
| Gene full name | ribonuclease P/MRP 30kDa subunit |
| Other gene symbols | TSG15 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004526 | Ribonuclease P activity | IEA | molecular_function |
| GO:0004540 | Ribonuclease activity | IEA | molecular_function |
| GO:0005634 | Nucleus | TAS | cellular_component |
| GO:0005655 | Nucleolar ribonuclease P complex | TAS | cellular_component |
| GO:0008033 | TRNA processing | IEA | biological_process |
| GO:0090305 | Nucleic acid phosphodiester bond hydrolysis | TAS | biological_process |
| GO:0090501 | RNA phosphodiester bond hydrolysis | TAS | biological_process |
| GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1875202158 | 0.7973986703 | 0.8440222431 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3448603535 |
| GSE13712_SHEAR | Up | 0.3029799031 |
| GSE13712_STATIC | Up | 0.1642110530 |
| GSE19018 | Down | -0.0458767070 |
| GSE19899_A1 | Up | 0.0276787938 |
| GSE19899_A2 | Down | -0.1398352095 |
| PubMed_21979375_A1 | Up | 0.2932128706 |
| PubMed_21979375_A2 | Up | 0.2918585667 |
| GSE35957 | Down | -0.2536473573 |
| GSE36640 | Down | -0.4142367174 |
| GSE54402 | Up | 0.1134158370 |
| GSE9593 | Up | 0.0971268115 |
| GSE43922 | Up | 0.1428427369 |
| GSE24585 | Down | -0.2361827500 |
| GSE37065 | Up | 0.0608743708 |
| GSE28863_A1 | Up | 0.0379652639 |
| GSE28863_A2 | Up | 0.4722571915 |
| GSE28863_A3 | Down | -0.5171043371 |
| GSE28863_A4 | Up | 0.2635791553 |
| GSE48662 | Up | 0.0401658822 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-615-3p | MIMAT0003283 | MIRT039974 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043167 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044349 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15a-5p | MIMAT0000068 | MIRT051319 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
