HCSGD entry for TM9SF1
1. General information
| Official gene symbol | TM9SF1 |
|---|---|
| Entrez ID | 10548 |
| Gene full name | transmembrane 9 superfamily member 1 |
| Other gene symbols | HMP70 MP70 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000421 | Autophagic vacuole membrane | IEA | cellular_component |
| GO:0005765 | Lysosomal membrane | IEA | cellular_component |
| GO:0006914 | Autophagy | IEA | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031410 | Cytoplasmic vesicle | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1606302990 | 0.7677244558 | 0.7947274624 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2918199806 |
| GSE13712_SHEAR | Up | 0.4754774135 |
| GSE13712_STATIC | Up | 0.2320908964 |
| GSE19018 | Down | -0.0561576668 |
| GSE19899_A1 | Down | -0.3048698701 |
| GSE19899_A2 | Down | -0.1457292107 |
| PubMed_21979375_A1 | Down | -0.5327059139 |
| PubMed_21979375_A2 | Down | -0.7512948977 |
| GSE35957 | Down | -0.2370276283 |
| GSE36640 | Up | 0.2009940238 |
| GSE54402 | Up | 0.0796422590 |
| GSE9593 | Up | 0.0328131296 |
| GSE43922 | Up | 0.4089851606 |
| GSE24585 | Up | 0.4092593947 |
| GSE37065 | Up | 0.1260085833 |
| GSE28863_A1 | Up | 0.3320558521 |
| GSE28863_A2 | Up | 0.1869939096 |
| GSE28863_A3 | Up | 0.0541534868 |
| GSE28863_A4 | Down | -0.0339966748 |
| GSE48662 | Up | 0.2360685969 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028483 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040194 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-107 | MIMAT0000104 | MIRT048305 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
