HCSGD entry for BATF
1. General information
| Official gene symbol | BATF |
|---|---|
| Entrez ID | 10538 |
| Gene full name | basic leucine zipper transcription factor, ATF-like |
| Other gene symbols | B-ATF BATF1 SFA-2 SFA2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001816 | Cytokine production | ISS | biological_process |
| GO:0002320 | Lymphoid progenitor cell differentiation | ISS | biological_process |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA ISS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0005737 | Cytoplasm | ISS | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006974 | Cellular response to DNA damage stimulus | ISS | biological_process |
| GO:0030330 | DNA damage response, signal transduction by p53 class mediator | ISS | biological_process |
| GO:0042832 | Defense response to protozoan | ISS | biological_process |
| GO:0043011 | Myeloid dendritic cell differentiation | ISS | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA ISS | molecular_function |
| GO:0045064 | T-helper 2 cell differentiation | ISS | biological_process |
| GO:0045190 | Isotype switching | ISS | biological_process |
| GO:0060218 | Hematopoietic stem cell differentiation | ISS | biological_process |
| GO:0072539 | T-helper 17 cell differentiation | ISS | biological_process |
| GO:0072540 | T-helper 17 cell lineage commitment | ISS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1018572965 | 0.8524090688 | 0.6642680624 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1481836987 |
| GSE13712_SHEAR | Up | 0.0069339733 |
| GSE13712_STATIC | Up | 0.0296610692 |
| GSE19018 | Up | 0.0979285401 |
| GSE19899_A1 | Up | 0.0795029678 |
| GSE19899_A2 | Up | 0.9339249813 |
| PubMed_21979375_A1 | Up | 0.3429430961 |
| PubMed_21979375_A2 | Up | 0.3550724091 |
| GSE35957 | Down | -0.0852811359 |
| GSE36640 | Down | -0.0734086941 |
| GSE54402 | Up | 0.1762323443 |
| GSE9593 | Up | 0.3839695812 |
| GSE43922 | Up | 0.1437318475 |
| GSE24585 | Up | 0.1514340818 |
| GSE37065 | Down | -0.0149422717 |
| GSE28863_A1 | Down | -0.4416075830 |
| GSE28863_A2 | Down | -0.4149119475 |
| GSE28863_A3 | Up | 0.5179545314 |
| GSE28863_A4 | Up | 0.1397428260 |
| GSE48662 | Down | -0.0636585754 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030216 | Microarray | Functional MTI (Weak) | 19088304 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 25540416 | Epstein-Barr virus nuclear antigen 3A partially coincides with EBNA3C genome-wide and is tethered to DNA through BATF complexes |
| 25540416 | EBNA3A was at MYC, CDKN2A/B, CCND2, CXCL9/10, and BCL2, together with RUNX3, BATF, IRF4, and SPI1 |
| 25540416 | ChIP-re-ChIP revealed complexes of EBNA3A on DNA with BATF |
Entries Per Page
Displaying Page of
