HCSGD entry for APPBP2
1. General information
| Official gene symbol | APPBP2 |
|---|---|
| Entrez ID | 10513 |
| Gene full name | amyloid beta precursor protein (cytoplasmic tail) binding protein 2 |
| Other gene symbols | HS.84084 PAT1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003777 | Microtubule motor activity | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | NAS | cellular_component |
| GO:0005737 | Cytoplasm | NAS | cellular_component |
| GO:0005874 | Microtubule | IEA | cellular_component |
| GO:0005875 | Microtubule associated complex | TAS | cellular_component |
| GO:0006886 | Intracellular protein transport | TAS | biological_process |
| GO:0008152 | Metabolic process | TAS | biological_process |
| GO:0030659 | Cytoplasmic vesicle membrane | IDA | cellular_component |
| GO:0046907 | Intracellular transport | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1635347783 | 0.2912036283 | 0.8008502975 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0109606778 |
| GSE13712_SHEAR | Up | 0.6376113329 |
| GSE13712_STATIC | Up | 0.6267006418 |
| GSE19018 | Up | 0.2938303368 |
| GSE19899_A1 | Down | -0.3931350913 |
| GSE19899_A2 | Down | -0.0401281059 |
| PubMed_21979375_A1 | Down | -0.6848904525 |
| PubMed_21979375_A2 | Down | -0.0529203687 |
| GSE35957 | Down | -0.1441002598 |
| GSE36640 | Up | 0.2730244650 |
| GSE54402 | Down | -0.2867526028 |
| GSE9593 | Up | 0.0331675392 |
| GSE43922 | Down | -0.2282743846 |
| GSE24585 | Up | 0.9016864524 |
| GSE37065 | Up | 0.0828720094 |
| GSE28863_A1 | Up | 0.1400832335 |
| GSE28863_A2 | Up | 0.2513017245 |
| GSE28863_A3 | Down | -0.9266324224 |
| GSE28863_A4 | Up | 0.1527147642 |
| GSE48662 | Down | -0.0308754338 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148a-3p | MIMAT0000243 | MIRT048025 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
