HCSGD entry for SEMA4F
1. General information
| Official gene symbol | SEMA4F |
|---|---|
| Entrez ID | 10505 |
| Gene full name | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F |
| Other gene symbols | M-SEMA PRO2353 S4F SEMAM SEMAW m-Sema-M |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004872 | Receptor activity | IEA | molecular_function |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0007267 | Cell-cell signaling | TAS | biological_process |
| GO:0007399 | Nervous system development | TAS | biological_process |
| GO:0007411 | Axon guidance | IEA TAS | biological_process |
| GO:0016020 | Membrane | TAS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030517 | Negative regulation of axon extension | IEA | biological_process |
| GO:0031290 | Retinal ganglion cell axon guidance | IEA | biological_process |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2874863531 | 0.1811945633 | 0.9867843091 | 0.8249822003 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2367381821 |
| GSE13712_SHEAR | Down | -0.4355303485 |
| GSE13712_STATIC | Down | -0.0684814493 |
| GSE19018 | Up | 0.4027661412 |
| GSE19899_A1 | Up | 0.0330533315 |
| GSE19899_A2 | Down | -0.3480286478 |
| PubMed_21979375_A1 | Up | 0.4032428372 |
| PubMed_21979375_A2 | Up | 0.1808904902 |
| GSE35957 | Down | -0.1032298611 |
| GSE36640 | Up | 1.1073134287 |
| GSE54402 | Down | -0.3745156720 |
| GSE9593 | Up | 0.5929413055 |
| GSE43922 | Up | 0.0572161984 |
| GSE24585 | Down | -0.1542096867 |
| GSE37065 | Down | -0.0210977538 |
| GSE28863_A1 | Down | -0.3381402513 |
| GSE28863_A2 | Down | -0.4512971838 |
| GSE28863_A3 | Up | 0.0098093177 |
| GSE28863_A4 | Down | -0.1233958107 |
| GSE48662 | Up | 0.4287527736 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
