HCSGD entry for CRTAP
1. General information
| Official gene symbol | CRTAP |
|---|---|
| Entrez ID | 10491 |
| Gene full name | cartilage associated protein |
| Other gene symbols | CASP LEPREL3 OI7 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005578 | Proteinaceous extracellular matrix | IEA | cellular_component |
| GO:0005788 | Endoplasmic reticulum lumen | TAS | cellular_component |
| GO:0007283 | Spermatogenesis | IEA | biological_process |
| GO:0018400 | Peptidyl-proline hydroxylation to 3-hydroxy-L-proline | IEA | biological_process |
| GO:0030198 | Extracellular matrix organization | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9357734585 | 0.0115458341 | 0.9999902473 | 0.2125289510 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1993192083 |
| GSE13712_SHEAR | Down | -0.7547888328 |
| GSE13712_STATIC | Down | -0.5420023960 |
| GSE19018 | Down | -0.1426407332 |
| GSE19899_A1 | Down | -1.0438112503 |
| GSE19899_A2 | Down | -0.6176544894 |
| PubMed_21979375_A1 | Down | -1.5750305827 |
| PubMed_21979375_A2 | Down | -1.0998434592 |
| GSE35957 | Up | 0.1080439493 |
| GSE36640 | Up | 0.4326932578 |
| GSE54402 | Down | -0.6909519155 |
| GSE9593 | Up | 0.5710958197 |
| GSE43922 | Down | -0.6685086832 |
| GSE24585 | Up | 0.1740155877 |
| GSE37065 | Up | 0.0438794868 |
| GSE28863_A1 | Up | 0.1662686626 |
| GSE28863_A2 | Up | 0.0370901584 |
| GSE28863_A3 | Down | -0.6276651111 |
| GSE28863_A4 | Down | -0.2464098183 |
| GSE48662 | Down | -0.0943686019 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-7-5p | MIMAT0000252 | MIRT025763 | Microarray | Functional MTI (Weak) | 19073608 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027681 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-1296-5p | MIMAT0005794 | MIRT036134 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038419 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041994 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
