HCSGD entry for LRRC41
1. General information
| Official gene symbol | LRRC41 |
|---|---|
| Entrez ID | 10489 |
| Gene full name | leucine rich repeat containing 41 |
| Other gene symbols | MUF1 RP4-636H5.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016567 | Protein ubiquitination | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3575431974 | 0.7587471335 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1294393842 |
| GSE13712_SHEAR | Up | 0.0039443229 |
| GSE13712_STATIC | Up | 0.0071103063 |
| GSE19018 | Down | -0.1667249130 |
| GSE19899_A1 | Down | -0.0217018346 |
| GSE19899_A2 | Up | 0.4734179515 |
| PubMed_21979375_A1 | Up | 0.5982400627 |
| PubMed_21979375_A2 | Up | 0.4572859811 |
| GSE35957 | Down | -0.0271629976 |
| GSE36640 | Up | 0.0121276308 |
| GSE54402 | Up | 0.1097768219 |
| GSE9593 | Up | 0.0264614419 |
| GSE43922 | Up | 0.1567095175 |
| GSE24585 | Up | 0.1744361948 |
| GSE37065 | Down | -0.0707597097 |
| GSE28863_A1 | Down | -0.0091632615 |
| GSE28863_A2 | Up | 0.3837817773 |
| GSE28863_A3 | Down | -0.6203840836 |
| GSE28863_A4 | Down | -0.2275773220 |
| GSE48662 | Down | -0.1727494192 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016965 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-93-3p | MIMAT0004509 | MIRT038887 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040052 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045506 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046461 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048205 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048516 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-5p | MIMAT0000072 | MIRT050707 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051581 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052252 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
