HCSGD entry for SLC9A6
1. General information
| Official gene symbol | SLC9A6 |
|---|---|
| Entrez ID | 10479 |
| Gene full name | solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 |
| Other gene symbols | MRSA NHE6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0006810 | Transport | TAS | biological_process |
| GO:0006811 | Ion transport | TAS | biological_process |
| GO:0006885 | Regulation of pH | IEA | biological_process |
| GO:0015385 | Sodium:hydrogen antiporter activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031901 | Early endosome membrane | IDA TAS | cellular_component |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0035725 | Sodium ion transmembrane transport | TAS | biological_process |
| GO:0055038 | Recycling endosome membrane | IDA | cellular_component |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
| GO:1902600 | Hydrogen ion transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0733237833 | 0.3667206641 | 0.5760942721 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3575014589 |
| GSE13712_SHEAR | Down | -0.2533359495 |
| GSE13712_STATIC | Up | 0.1211276423 |
| GSE19018 | Up | 0.6260606205 |
| GSE19899_A1 | Up | 0.2861698444 |
| GSE19899_A2 | Down | -0.1110306776 |
| PubMed_21979375_A1 | Up | 0.3942877073 |
| PubMed_21979375_A2 | Up | 0.5646886437 |
| GSE35957 | Up | 0.1942440834 |
| GSE36640 | Up | 0.7837908542 |
| GSE54402 | Down | -0.1187553326 |
| GSE9593 | Up | 0.3730180805 |
| GSE43922 | Up | 0.0376413496 |
| GSE24585 | Down | -0.3559683261 |
| GSE37065 | Up | 0.2815943321 |
| GSE28863_A1 | Down | -0.5209479634 |
| GSE28863_A2 | Up | 0.2615277966 |
| GSE28863_A3 | Down | -1.2398428007 |
| GSE28863_A4 | Up | 0.1439893363 |
| GSE48662 | Down | -0.1392254282 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027197 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030928 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031859 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-31-3p | MIMAT0004504 | MIRT038942 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-421 | MIMAT0003339 | MIRT039396 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-23b-3p | MIMAT0000418 | MIRT046279 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048876 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
