HCSGD entry for FAM3C
1. General information
| Official gene symbol | FAM3C |
|---|---|
| Entrez ID | 10447 |
| Gene full name | family with sequence similarity 3, member C |
| Other gene symbols | ILEI |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005125 | Cytokine activity | NAS | molecular_function |
| GO:0005576 | Extracellular region | NAS | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016023 | Cytoplasmic membrane-bounded vesicle | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1353960488 | 0.8060033585 | 0.7434939362 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0741310619 |
| GSE13712_SHEAR | Up | 0.0099333412 |
| GSE13712_STATIC | Down | -0.0426196712 |
| GSE19018 | Down | -0.0748958113 |
| GSE19899_A1 | Up | 0.1583802685 |
| GSE19899_A2 | Up | 0.0390247786 |
| PubMed_21979375_A1 | Up | 0.3949317722 |
| PubMed_21979375_A2 | Up | 0.0574994647 |
| GSE35957 | Up | 0.2694896682 |
| GSE36640 | Up | 0.4102569409 |
| GSE54402 | Up | 0.3079926896 |
| GSE9593 | Down | -0.0122240516 |
| GSE43922 | Up | 0.5172559206 |
| GSE24585 | Down | -0.1546004347 |
| GSE37065 | Up | 0.1867787400 |
| GSE28863_A1 | Up | 0.1543265499 |
| GSE28863_A2 | Up | 0.6026103943 |
| GSE28863_A3 | Down | -0.1229896758 |
| GSE28863_A4 | Down | -0.1312683265 |
| GSE48662 | Down | -0.7792731778 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-21-5p | MIMAT0000076 | MIRT002420 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-375 | MIMAT0000728 | MIRT019826 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020690 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-145-5p | MIMAT0000437 | MIRT021525 | Reporter assay;Microarray | Functional MTI | 21351259 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025419 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-1227-3p | MIMAT0005580 | MIRT036403 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1226-3p | MIMAT0005577 | MIRT036499 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-769-3p | MIMAT0003887 | MIRT039081 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040705 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-342-3p | MIMAT0000753 | MIRT043707 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048753 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-21-5p | MIMAT0000076 | NA | hsa-miR-21 | 17991735 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
