HCSGD entry for C1D
1. General information
| Official gene symbol | C1D |
|---|---|
| Entrez ID | 10438 |
| Gene full name | C1D nuclear receptor corepressor |
| Other gene symbols | LRP1 SUN-CoR SUNCOR hC1D |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000176 | Nuclear exosome (RNase complex) | TAS | cellular_component |
| GO:0000460 | Maturation of 5.8S rRNA | IMP | biological_process |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003714 | Transcription corepressor activity | IEA | molecular_function |
| GO:0003723 | RNA binding | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006915 | Apoptotic process | IEA | biological_process |
| GO:0016922 | Ligand-dependent nuclear receptor binding | IEA | molecular_function |
| GO:0017053 | Transcriptional repressor complex | IEA | cellular_component |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1421936401 | 0.8289809544 | 0.7571059370 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0030525594 |
| GSE13712_SHEAR | Up | 0.1216225209 |
| GSE13712_STATIC | Up | 0.0912334831 |
| GSE19018 | Up | 0.0379256502 |
| GSE19899_A1 | Up | 0.5474415564 |
| GSE19899_A2 | Up | 0.2138053153 |
| PubMed_21979375_A1 | Up | 1.4722378690 |
| PubMed_21979375_A2 | Up | 0.3636998861 |
| GSE35957 | Up | 0.2136806040 |
| GSE36640 | Up | 0.2344530529 |
| GSE54402 | Down | -0.1376516055 |
| GSE9593 | Down | -0.2661960849 |
| GSE43922 | Up | 0.0327374403 |
| GSE24585 | Down | -0.5589197553 |
| GSE37065 | Up | 0.0533114912 |
| GSE28863_A1 | Up | 0.0066578261 |
| GSE28863_A2 | Up | 0.0473002622 |
| GSE28863_A3 | Up | 0.0650004450 |
| GSE28863_A4 | Up | 0.1060079998 |
| GSE48662 | Down | -0.0192221885 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT004148 | Microarray | Functional MTI (Weak) | 16822819 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT004148 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT005157 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024488 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029668 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
