HCSGD entry for BASP1
1. General information
| Official gene symbol | BASP1 |
|---|---|
| Entrez ID | 10409 |
| Gene full name | brain abundant, membrane attached signal protein 1 |
| Other gene symbols | CAP-23 CAP23 NAP-22 NAP22 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003714 | Transcription corepressor activity | IMP | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005856 | Cytoskeleton | TAS | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007356 | Thorax and anterior abdomen determination | ISS | biological_process |
| GO:0008180 | COP9 signalosome | IDA | cellular_component |
| GO:0008406 | Gonad development | ISS | biological_process |
| GO:0016607 | Nuclear speck | ISS | cellular_component |
| GO:0019904 | Protein domain specific binding | IPI | molecular_function |
| GO:0030426 | Growth cone | IEA | cellular_component |
| GO:0044212 | Transcription regulatory region DNA binding | ISS | molecular_function |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IDA IMP | biological_process |
| GO:0060231 | Mesenchymal to epithelial transition | ISS | biological_process |
| GO:0060421 | Positive regulation of heart growth | ISS | biological_process |
| GO:0060539 | Diaphragm development | ISS | biological_process |
| GO:0072075 | Metanephric mesenchyme development | ISS | biological_process |
| GO:0072112 | Glomerular visceral epithelial cell differentiation | ISS | biological_process |
| GO:2001076 | Positive regulation of metanephric ureteric bud development | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8077249193 | 0.2948332928 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0352715500 |
| GSE13712_SHEAR | Up | 0.2348501809 |
| GSE13712_STATIC | Up | 0.3668502581 |
| GSE19018 | Up | 0.0391168441 |
| GSE19899_A1 | Down | -0.1522039202 |
| GSE19899_A2 | Up | 0.1393195044 |
| PubMed_21979375_A1 | Down | -0.4199032764 |
| PubMed_21979375_A2 | Down | -0.0424706377 |
| GSE35957 | Down | -0.0832042614 |
| GSE36640 | Up | 0.0543702202 |
| GSE54402 | Down | -0.3459386088 |
| GSE9593 | Down | -0.0715444847 |
| GSE43922 | Down | -0.0411996567 |
| GSE24585 | Down | -0.5003677415 |
| GSE37065 | Down | -0.1115158910 |
| GSE28863_A1 | Up | 0.0048616584 |
| GSE28863_A2 | Up | 0.2167067227 |
| GSE28863_A3 | Up | 0.2476982418 |
| GSE28863_A4 | Down | -0.0934421267 |
| GSE48662 | Down | -0.0228800579 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-21-5p | MIMAT0000076 | MIRT000173 | Luciferase reporter assay//Quantitative proteomic approach | Functional MTI | 19253296 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016272 | Proteomics | Functional MTI (Weak) | 21512034 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037168 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
