HCSGD entry for SCML2
1. General information
| Official gene symbol | SCML2 |
|---|---|
| Entrez ID | 10389 |
| Gene full name | sex comb on midleg-like 2 (Drosophila) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | TAS | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | TAS | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0009653 | Anatomical structure morphogenesis | TAS | biological_process |
| GO:0031519 | PcG protein complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9509339653 | 0.0620460925 | 0.9999902473 | 0.4696863140 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1037333286 |
| GSE13712_SHEAR | Down | -0.2653472134 |
| GSE13712_STATIC | Down | -0.0599295561 |
| GSE19018 | Down | -0.4347987838 |
| GSE19899_A1 | Down | -0.0442135905 |
| GSE19899_A2 | Down | -0.0576764011 |
| PubMed_21979375_A1 | Up | 0.5491616333 |
| PubMed_21979375_A2 | Down | -0.4220100443 |
| GSE35957 | Down | -0.2104919637 |
| GSE36640 | Down | -0.5358012794 |
| GSE54402 | Down | -0.0388603210 |
| GSE9593 | Down | -0.0989877514 |
| GSE43922 | Down | -0.5229602793 |
| GSE24585 | Down | -0.4261816674 |
| GSE37065 | Down | -0.0069820680 |
| GSE28863_A1 | Down | -0.1027530551 |
| GSE28863_A2 | Up | 0.1765197285 |
| GSE28863_A3 | Down | -0.2500138809 |
| GSE28863_A4 | Up | 0.1602921210 |
| GSE48662 | Down | -0.2400706717 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-331-3p | MIMAT0000760 | MIRT019241 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-340-5p | MIMAT0004692 | MIRT019552 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030462 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-769-5p | MIMAT0003886 | MIRT039198 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042531 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049207 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052303 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
