HCSGD entry for HMG20B
1. General information
| Official gene symbol | HMG20B |
|---|---|
| Entrez ID | 10362 |
| Gene full name | high mobility group 20B |
| Other gene symbols | BRAF25 BRAF35 HMGX2 HMGXB2 PP7706 SMARCE1r SOXL pp8857 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005694 | Chromosome | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0007049 | Cell cycle | IEA | biological_process |
| GO:0007596 | Blood coagulation | TAS | biological_process |
| GO:0016568 | Chromatin modification | IEA | biological_process |
| GO:0033234 | Negative regulation of protein sumoylation | IEA | biological_process |
| GO:0035914 | Skeletal muscle cell differentiation | IEA | biological_process |
| GO:0045666 | Positive regulation of neuron differentiation | IEA | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9688859846 | 0.0431961780 | 0.9999902473 | 0.3911133815 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1908841146 |
| GSE13712_SHEAR | Down | -0.3029320794 |
| GSE13712_STATIC | Down | -0.3535398094 |
| GSE19018 | Up | 0.0732151318 |
| GSE19899_A1 | Down | -0.4825398030 |
| GSE19899_A2 | Down | -0.0925245920 |
| PubMed_21979375_A1 | Down | -0.2613265648 |
| PubMed_21979375_A2 | Down | -1.2310039827 |
| GSE35957 | Down | -0.3856767474 |
| GSE36640 | Down | -0.0608927600 |
| GSE54402 | Up | 0.0518695264 |
| GSE9593 | Down | -0.1374633372 |
| GSE43922 | Down | -0.4162654796 |
| GSE24585 | Up | 0.0703875992 |
| GSE37065 | Down | -0.0240816801 |
| GSE28863_A1 | Down | -0.2703962925 |
| GSE28863_A2 | Down | -0.1591619410 |
| GSE28863_A3 | Down | -0.0662285265 |
| GSE28863_A4 | Up | 0.1815704673 |
| GSE48662 | Up | 0.2057231287 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
