HCSGD entry for SNAPC5
1. General information
| Official gene symbol | SNAPC5 |
|---|---|
| Entrez ID | 10302 |
| Gene full name | small nuclear RNA activating complex, polypeptide 5, 19kDa |
| Other gene symbols | SNAP19 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | TAS | molecular_function |
| GO:0005634 | Nucleus | TAS | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0006383 | Transcription from RNA polymerase III promoter | TAS | biological_process |
| GO:0006384 | Transcription initiation from RNA polymerase III promoter | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8960696934 | 0.1011464648 | 0.9999902473 | 0.6089590576 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2327720000 |
| GSE13712_SHEAR | Down | -0.2303741399 |
| GSE13712_STATIC | Down | -0.0490954143 |
| GSE19018 | Down | -0.5502582790 |
| GSE19899_A1 | Down | -0.2560447077 |
| GSE19899_A2 | Down | -0.6056616818 |
| PubMed_21979375_A1 | Down | -0.2879277791 |
| PubMed_21979375_A2 | Down | -0.2821634897 |
| GSE35957 | Down | -0.2523048373 |
| GSE36640 | Up | 0.5446858533 |
| GSE54402 | Down | -0.0926321035 |
| GSE9593 | Down | -0.1218276842 |
| GSE43922 | Down | -0.4471158393 |
| GSE24585 | Up | 0.1772888603 |
| GSE37065 | Up | 0.2125344009 |
| GSE28863_A1 | Up | 0.0158670294 |
| GSE28863_A2 | Down | -0.0681442597 |
| GSE28863_A3 | Down | -0.2832125080 |
| GSE28863_A4 | Up | 0.0831766732 |
| GSE48662 | Down | -0.0755607485 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029459 | Microarray | Functional MTI (Weak) | 19088304 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
