HCSGD entry for STX6

1. General information

Official gene symbolSTX6
Entrez ID10228
Gene full namesyntaxin 6
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000139Golgi membraneIEAcellular_component
GO:0005484SNAP receptor activityIBA IEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005769Early endosomeIDAcellular_component
GO:0005794Golgi apparatusIDA IEAcellular_component
GO:0005886Plasma membraneTAScellular_component
GO:0006886Intracellular protein transportIBA IEAbiological_process
GO:0006906Vesicle fusionIPIbiological_process
GO:0007032Endosome organizationIEAbiological_process
GO:0016021Integral component of membraneIBA IEAcellular_component
GO:0016192Vesicle-mediated transportIEAbiological_process
GO:0030136Clathrin-coated vesicleTAScellular_component
GO:0031201SNARE complexIDAcellular_component
GO:0032588Trans-Golgi network membraneIEA ISScellular_component
GO:0042147Retrograde transport, endosome to GolgiIMPbiological_process
GO:0048193Golgi vesicle transportIEAbiological_process
GO:0048471Perinuclear region of cytoplasmIDAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.08420628400.92186687060.60990467801.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0604003164
GSE13712_SHEARDown-0.0675201762
GSE13712_STATICDown-0.1094151447
GSE19018Up0.2194727783
GSE19899_A1Up0.4116626917
GSE19899_A2Up0.5928888546
PubMed_21979375_A1Up0.6728333570
PubMed_21979375_A2Up0.3961333546
GSE35957Up0.3120582913
GSE36640Up0.0697537001
GSE54402Up0.4803263267
GSE9593Up0.3842099554
GSE43922Up0.3199737169
GSE24585Up0.1281181569
GSE37065Down-0.0545960239
GSE28863_A1Down-0.2232752628
GSE28863_A2Up0.0095299484
GSE28863_A3Down-0.4782504234
GSE28863_A4Down-0.1428722535
GSE48662Down-0.1325336494

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-375MIMAT0000728MIRT019742MicroarrayFunctional MTI (Weak)20215506
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.