HCSGD entry for SSX3

1. General information

Official gene symbolSSX3
Entrez ID10214
Gene full namesynovial sarcoma, X breakpoint 3
Other gene symbolsCT5.3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003676Nucleic acid bindingIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.64180410700.87593257480.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0813620375
GSE13712_SHEARUp0.0174729277
GSE13712_STATICDown-0.0165671648
GSE19018Up0.2261336442
GSE19899_A1Up0.0301248973
GSE19899_A2Up0.1512099189
PubMed_21979375_A1Up0.0834607153
PubMed_21979375_A2Up0.0887610163
GSE35957Up0.0637154167
GSE36640Up0.0664676291
GSE54402Up0.0925829418
GSE9593Down-0.0155553780
GSE43922Up0.0109203578
GSE24585Up0.1145855274
GSE37065Up0.0563302765
GSE28863_A1Down-0.2927520539
GSE28863_A2Up0.0567091092
GSE28863_A3Up0.0630514473
GSE28863_A4Down-0.0779128905
GSE48662Up0.0526649590

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.