HCSGD entry for CDH17
1. General information
| Official gene symbol | CDH17 |
|---|---|
| Entrez ID | 1015 |
| Gene full name | cadherin 17, LI cadherin (liver-intestine) |
| Other gene symbols | CDH16 HPT-1 HPT1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005215 | Transporter activity | TAS | molecular_function |
| GO:0005427 | Proton-dependent oligopeptide secondary active transmembrane transporter activity | IEA | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006810 | Transport | NAS | biological_process |
| GO:0007155 | Cell adhesion | TAS | biological_process |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016323 | Basolateral plasma membrane | IEA | cellular_component |
| GO:0016339 | Calcium-dependent cell-cell adhesion | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6528797652 | 0.8378171802 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0541351067 |
| GSE13712_SHEAR | Up | 0.0535835567 |
| GSE13712_STATIC | Up | 0.0017597540 |
| GSE19018 | Up | 0.0349309762 |
| GSE19899_A1 | Up | 0.1629904569 |
| GSE19899_A2 | Down | -0.0012730346 |
| PubMed_21979375_A1 | Up | 0.0898288293 |
| PubMed_21979375_A2 | Up | 0.1668075496 |
| GSE35957 | Up | 0.3265463857 |
| GSE36640 | Down | -0.0511846848 |
| GSE54402 | Down | -0.0838094966 |
| GSE9593 | Up | 0.0023055972 |
| GSE43922 | Up | 0.0079766372 |
| GSE24585 | Down | -0.1450398146 |
| GSE37065 | Down | -0.0110204819 |
| GSE28863_A1 | Down | -0.0991996237 |
| GSE28863_A2 | Down | -0.0474925687 |
| GSE28863_A3 | Up | 0.1433559494 |
| GSE28863_A4 | Up | 0.0429950027 |
| GSE48662 | Up | 0.0177673671 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
