HCSGD entry for FAM13A
1. General information
| Official gene symbol | FAM13A |
|---|---|
| Entrez ID | 10144 |
| Gene full name | family with sequence similarity 13, member A |
| Other gene symbols | ARHGAP48 FAM13A1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005096 | GTPase activator activity | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0007165 | Signal transduction | IEA | biological_process |
| GO:0007264 | Small GTPase mediated signal transduction | TAS | biological_process |
| GO:0051056 | Regulation of small GTPase mediated signal transduction | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6068176247 | 0.1475772843 | 0.9999902473 | 0.7427116061 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0707359896 |
| GSE13712_SHEAR | Down | -0.0854596664 |
| GSE13712_STATIC | Down | -0.0889084392 |
| GSE19018 | Up | 0.9054987505 |
| GSE19899_A1 | Up | 0.0135016374 |
| GSE19899_A2 | Down | -0.7241518717 |
| PubMed_21979375_A1 | Down | -0.0842003287 |
| PubMed_21979375_A2 | Down | -0.3811244037 |
| GSE35957 | Up | 0.0207080575 |
| GSE36640 | Down | -0.9323982080 |
| GSE54402 | Down | -0.3557691334 |
| GSE9593 | Down | -0.1122974498 |
| GSE43922 | Up | 0.0352121977 |
| GSE24585 | Up | 0.0176306400 |
| GSE37065 | Up | 0.3382742088 |
| GSE28863_A1 | Up | 0.3835094050 |
| GSE28863_A2 | Up | 0.1047402562 |
| GSE28863_A3 | Down | -0.1114133735 |
| GSE28863_A4 | Down | -0.0274885733 |
| GSE48662 | Down | -0.3454956146 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-615-3p | MIMAT0003283 | MIRT039722 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047429 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
