HCSGD entry for CDH16

1. General information

Official gene symbolCDH16
Entrez ID1014
Gene full namecadherin 16, KSP-cadherin
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007155Cell adhesionTASbiological_process
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.77063491130.82892339960.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0577918411
GSE13712_SHEARUp0.0146901288
GSE13712_STATICUp0.0020321604
GSE19018Down-0.0216118001
GSE19899_A1Up0.0435549089
GSE19899_A2Down-0.0498646106
PubMed_21979375_A1Up0.2821112963
PubMed_21979375_A2Down-0.0560211099
GSE35957Up0.0486617922
GSE36640Down-0.0033783609
GSE54402Down-0.0556681530
GSE9593Down-0.1780629961
GSE43922Up0.1229883342
GSE24585Down-0.0037584218
GSE37065Down-0.1207448613
GSE28863_A1Up0.0244993193
GSE28863_A2Up0.0995480036
GSE28863_A3Up0.1728402667
GSE28863_A4Up0.1987433056
GSE48662Down-0.0359069675

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.