HCSGD entry for COL4A3BP

1. General information

Official gene symbolCOL4A3BP
Entrez ID10087
Gene full namecollagen, type IV, alpha 3 (Goodpasture antigen) binding protein
Other gene symbolsCERT CERTL GPBP STARD11
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000902Cell morphogenesisIEAbiological_process
GO:0001701In utero embryonic developmentIEAbiological_process
GO:0003007Heart morphogenesisIEAbiological_process
GO:0004672Protein kinase activityTASmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005739MitochondrionIEAcellular_component
GO:0005789Endoplasmic reticulum membraneTAScellular_component
GO:0005794Golgi apparatusIDAcellular_component
GO:0005829CytosolTAScellular_component
GO:0006468Protein phosphorylationTASbiological_process
GO:0006665Sphingolipid metabolic processTASbiological_process
GO:0006672Ceramide metabolic processIEAbiological_process
GO:0006936Muscle contractionIEAbiological_process
GO:0006955Immune responseNASbiological_process
GO:0007029Endoplasmic reticulum organizationIEAbiological_process
GO:0007165Signal transductionIEAbiological_process
GO:0008283Cell proliferationIEAbiological_process
GO:0008289Lipid bindingIEAmolecular_function
GO:0030148Sphingolipid biosynthetic processTASbiological_process
GO:0034976Response to endoplasmic reticulum stressIEAbiological_process
GO:0035620Ceramide transporter activityIDAmolecular_function
GO:0035621ER to Golgi ceramide transportIGI IMPbiological_process
GO:0044281Small molecule metabolic processTASbiological_process
GO:0048471Perinuclear region of cytoplasmIDAcellular_component
GO:0055088Lipid homeostasisIEAbiological_process
GO:0070273Phosphatidylinositol-4-phosphate bindingIDAmolecular_function
GO:0070584Mitochondrion morphogenesisIEAbiological_process
GO:0097001Ceramide bindingIDAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.00675983820.96090710080.21592924761.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.6824325761
GSE13712_SHEARDown-0.3358435325
GSE13712_STATICDown-0.3578425278
GSE19018Up0.3705491040
GSE19899_A1Up0.1466450808
GSE19899_A2Up0.4940999860
PubMed_21979375_A1Up0.3454704656
PubMed_21979375_A2Up0.6636935989
GSE35957Up0.4850295052
GSE36640Up0.7564991608
GSE54402Up0.5557233116
GSE9593Up1.5465619875
GSE43922Down-0.0274939845
GSE24585Up0.4985910944
GSE37065Up0.0286043221
GSE28863_A1Up0.2252380109
GSE28863_A2Up0.6574432057
GSE28863_A3Down-0.4003776793
GSE28863_A4Down-0.2470839224
GSE48662Up0.4368436493

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.


PubMed ID of the article

Sentenece the gene occurs

20236389The ceramide transporter and the Goodpasture antigen binding protein: one protein--one function
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