HCSGD entry for LINC00556

1. General information

Official gene symbolLINC00556
Entrez ID100861551
Gene full namelong intergenic non-protein coding RNA 556
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

Not in the Gene ontology

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.65287274420.69378251590.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0342229370
GSE13712_SHEARDown-0.1986715898
GSE13712_STATICUp0.0388269664
GSE19018Down-0.0218183241
GSE19899_A1Up0.1287545475
GSE19899_A2Down-0.2053284625
PubMed_21979375_A1Up0.1759896676
PubMed_21979375_A2Down-0.1659458346
GSE35957Up0.0458896162
GSE36640Down-0.0759034857
GSE54402Up0.0466053029
GSE9593Up0.0972813701
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1Up0.2522390087
GSE28863_A2Up0.1856078294
GSE28863_A3Down-0.1565643985
GSE28863_A4Up0.0135136221
GSE48662--

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.