HCSGD entry for CDH9
1. General information
| Official gene symbol | CDH9 |
|---|---|
| Entrez ID | 1007 |
| Gene full name | cadherin 9, type 2 (T1-cadherin) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016337 | Cell-cell adhesion | NAS | biological_process |
| GO:0034329 | Cell junction assembly | TAS | biological_process |
| GO:0034332 | Adherens junction organization | TAS | biological_process |
| GO:0045216 | Cell-cell junction organization | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6921289275 | 0.8910510011 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1184954670 |
| GSE13712_SHEAR | Up | 0.0234742317 |
| GSE13712_STATIC | Up | 0.1267966445 |
| GSE19018 | Down | -0.0650333146 |
| GSE19899_A1 | Up | 0.0937668982 |
| GSE19899_A2 | Up | 0.3839589100 |
| PubMed_21979375_A1 | Up | 0.0114247500 |
| PubMed_21979375_A2 | Up | 0.0560514229 |
| GSE35957 | Up | 0.1371171023 |
| GSE36640 | Up | 0.1348139634 |
| GSE54402 | Up | 0.0429410254 |
| GSE9593 | Down | -0.1331286495 |
| GSE43922 | Up | 0.0148067106 |
| GSE24585 | Down | -0.0695744135 |
| GSE37065 | Down | -0.0880895202 |
| GSE28863_A1 | Up | 0.0087994697 |
| GSE28863_A2 | Up | 0.0204653228 |
| GSE28863_A3 | Up | 0.0138411484 |
| GSE28863_A4 | Down | -0.0043971521 |
| GSE48662 | Down | -0.0101495106 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030325 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
